Dinneny lab, June 2017
José grew up in Reseda, CA in the former orange orchards of the San Fernando Valley. He got his BS from UC Berkeley in Plant Biology and Genetics in the Department of Plant and Microbial Biology. He got his research start as an undergraduate intern in the lab of Robert L. Fischer. He went to UC San Diego to get his PhD working in the labs of Detlef Weigel at the Salk Institute for Biological Science and Martin Yanofsky in the Division of Biology, UCSD. His work focused on the cloning and characterization of JAGGED and NUBBIN in flower and fruit development. He then went to Duke University to do his post-doctoral studies with Philip Benfey. There he utilized Fluorescence Activated Cell Sorting (FACS) to develop the first tissue-specific map of transcriptional changes occurring during abiotic stress. José established his independent lab at the Temasek Lifesciences Laboratory (TLL) in Singapore with a joint appointment at the National University of Singapore, Department of Biological Sciences. He was an inaugural fellow of the National Research Foundation, Singapore. José moved his lab in 2011 to the Carnegie Institution for Science, Department of Plant Biology and has an adjunct appointment with the Biology Department at Stanford University. José is a member of the Science Policy Committee at the American Society of Plant Biologists, a member of the North American Arabidopsis Steering Committee, a Monitoring Editor at Plant Physiology and an HHMI-Simons Faculty Scholar. When José is not thinking about the roots of environmental responses he enjoys spending time with his family, cooking and fiddling with his guitars.
Lina Duan, Postdoc
Lina is a former graduate student and current postdoc in the lab. Lina’s recent paper showed that the endodermis is an important signaling center during the regulation of lateral root growth in high saline conditions. She is extending this work using a genetic approach to identify new genes that control the spatial patterning of ABA responses under stress.
Neil Robbins, Graduate student, Stanford Biology
A native of Arizona, Neil understands the importance of water for plant biology. When he’s not imagining what each lab member looks like in cartoon form, he’s developing methods for understanding hydropatterning in maize roots. Neil is using genetic and physiological approaches to understand how water creates positional biases in the root that regulate root development.
Jose Sebastian, Postdoc
Pronounced “Jos”, Jose comes to our lab from the Boyce Thomson Institute where he worked with Jiyoung Lee to understand the regulation of root growth by SHORTROOT and cytokinin signaling. Jose brings his developmental credentials to bear on the problem of how root growth and development are affected by drought in Setaria viridis.
Wei Feng, Postdoc
Wei (the one in blue stripes) received his PhD from Indiana University where he worked with Scott Michaels on various projects ranging from flower time regulation to heterochromatin organization in Arabidopsis. His interest in the inflorescence continues as he is now working on a collaborative project to understand how drought stress affects the development of maize inflorescence. At the same time, he expands his research from shoot to root to study how plants sense osmotic stress by generating novel reporter lines.
Heike Lindner, Postdoc
Heike comes from the lab of Ueli Grossniklaus from the University of Zurich where she worked on plant fertilization. At Carnegie, Heike is interested in understanding the secret life of roots in soil. Heike will use the recently developed GLO-Roots system (Growth and Luminescence Observatory for Roots, U.S. patent application 13/970,960), which allows the study of root architecture and gene expression from germination to senescence in soil-grown plants using dual color luminescence imaging. Heike exploit natural variation between Arabidopsis thaliana accessions to identify genes involved in the response of root systems to simulated drought. Any loci identified will NOT be named after Etruscan goddesses of fertility, however.
Therese LaRue, Graduate Student, Stanford University
Therese is a graduate student originally from Boston, MA. She completed her undergraduate degree at Skidmore College and did internships at The Donald Danforth Plant Science Center and Cold Spring Harbor. When she’s not “partying with trees”, Therese is working to understand the adaptive responses of roots to salinity in soil.
Josep Vilarasa-Blasi, Postdoc
Josep or “Pep” comes to us from the lab of Ana Caño-Delgado’s lab at the Center for Research in Agricultural Genomics in Spain where he studied the role of BRAVO in regulating Brassinosteroid responses and root development. He is deftly moving his studies to single-celled organisms such as Chlamydomonas to identify key regulators of osmo-signaling. Bravo, Pep!
Ankit Srinivas, Lab Assistant
Ankit is a Bay Area native and super excited about working with the GLO-Roots team to perform our first GWAS experiment. Ankit is interested in pursuing a career in veterinary medicine and is proud of his pooch-carrying capacity. Right now all he’s lifting are rhizotron laden-boxes, which I’m sure is just as fun. Ankit’s enthusiasm is an inspiration to us all, even GLO-Bot the rhizotron-handling robot.
Ying Sun, Graduate Student, Stanford University
Ying comes to our lab from Las Vegas where she learned that what happens in the Dinneny lab stays in PNAS, Plant Cell and eLife ;-). Before joining the Stanford Biology program she did her Bachelor’s at UCSD, working in the lab of Steve Kay at odd hours providing manual automation for their circadian studies. Today she is starting a new project in the lab to understand how ABA-dependent gene regulatory networks evolve in the Brassicaceae to confer salt tolerance in halophytes.
Michael Guzman, Undergraduate Intern
Michael comes to our lab this summer from Santa Clara University in the heart of Silicon Valley. He’s working with Pep to characterize Chlamy mutants that disrupt growth under salinity and osmotic stress. Michael is multitalented, but doesn’t like to toot his own horn. Instead he plays flute and is the manager for the SCU Orchestra.
Jennifer Brophy, Postdoc
Jenn is a Cal grad (“Go Bears!”) and received her PhD from MIT working with synthetic biologist extraordinare Chris Voigt where she developed methods to tune gene expression and engineer recalcitrant species of bacteria. Seeing the tremendous potential of manipulating the genomes of plants, she’s joined the lab to develop new methods for plant transformation in cereal crops and is interested in synthetic environments as a means of manipulating the lifecycle of plants beyond the norm.
Tamara Vellosillo, Postdoc/Lab Manager
Tamara comes from Spain where she worked with Carmen Castresana studying the role of Oxylipins in the regulation of growth and the cell wall. Being interested in how walls are built she decided to come to the US (pre-Trump!) for a postdoc with Carnegie’s former director Chris Somerville at the Berkeley Energy Biosciences Institute where she studied novel factors controlling cellulose biosynthesis. Tamara joins our team to help make 2017 the year of the Chlamy and is characterizing the large number of mutants we’ve identified in the osmo-sensory pathway.
Jackie Osaki, Stanford undergraduate
Jackie is a student at Stanford and comes to our lab from our former neighbors, the Jonikas Lab. Sad as their departure was, we are super happy to have Jackie join our group to work with team Chlamy (Pep and Tamara) to make 2017 the year of the Chlamy! She will use her mastery of highthroughput culturing skills to characterize a host of mutants defective in osmosensing.
Cesar Cuevas-Velazquez, Postdoc
Cesar joins our group from Alejandra Covarrubias-Robles at the Instituto de Biotechnologia, UNAM, Mexico where he used NMR and biochemical techniques to understand how LEA proteins act as osmotic stress dependent chaperones. In our group Cesar will explore a very touchy subject and develop fluorescence-based sensor proteins for detecting osmotic and other mechanical cues in the cell using high-throughput approaches.